Exporting descriptives table to Markdown format
export2md.Rd
This function takes the result of createTable
and exports the tables to markdown format. It may be useful when inserting R code chunks in a Markdown file (.Rmd).
Usage
export2md(x, which.table = "descr", nmax = TRUE, nmax.method = 1, header.labels = c(),
caption = NULL, format = "html", width = Inf, strip = FALSE,
first.strip = FALSE, background = "#D2D2D2", size = NULL, landscape=FALSE,
header.background=NULL, header.color=NULL, position="center", ...)
Arguments
- x
an object of class 'createTable'.
- which.table
character indicating which table is printed. Possible values are 'descr' or 'avail'(partial matching allowed), exporting descriptives by groups table or availability data table, respectively. Default value is 'descr'.
- nmax
logical, indicating whether to show the number of subjects with at least one valid value across all row-variables. Default value is TRUE.
- nmax.method
integer with two possible values: 1-number of observation with valid values in at least one row-variable; 2-total number of observations or rows in the data set or in the group. Default value is 1.
- header.labels
see the 'header.labels' argument from
createTable
.character specifying the table caption for descriptives and available data table. If which.table='both' the first element of 'caption' will be assigned to descriptives table and the second to available data table. If it is set to "", no caption is inserted. Default value is NULL, which writes 'Summary descriptives table by groups of 'y” for descriptives table and 'Available data by groups of 'y” for the available data table.
- format
character with three options: 'html', 'latex' or 'markdown'. If missing, it tries to guess the default options of Rmarkdown file in which the table in inserted, or html if it is not in a Rmarkdown file or format not specified.
- width
character string to specify the width of first column of descriptive table. It is ignored when exporting to Word. Default value is
Inf
which makes the first column to autoadjust to variable names. Other examples are '10cm', '3in' or '30em'.- strip
logical. It shadows table lines corresponding to each variable.
- first.strip
logical. It determines whether to shadow the first variable (TRUE) or the second (FALSE). It only applies when
strip
argument is true.- background
color code in HEX format for shadowed lines. You can use
rgb
function to convert red, green and blue to HEX code. Default color is '#D2D2D2'.- size
numeric. Size of descriptive table. Default value is NULL which creates the table in default size.
- landscape
logical. It determines whether to place the table in landscape (horizontal) format. It only applies when format is 'latex'. Default value is FALSE.
- header.background
color character for table header or 'NULL'. Default value is 'NULL'.
- header.color
color character for table header text. Default color is 'NULL'.
- position
character specifying the table location. Possible values are 'left', 'center', 'right', 'float_left' and 'float_right'. It only applies when compiling to HTML or PDF. Default value is 'center'. See
kable_styling
position argument for more info.- ...
arguments passed to
kable
.
Value
It does not return anything, but the Markdown code to generate the descriptive or available table is printed.
Note
The way to compute the 'N' shown in the bivariate table header, controlled by 'nmax' argument, has been changed from previous versions (<1.3). In the older versions 'N' was computed as the maximum across the cells withing each column (group) from the 'available data' table ('avail').
Stratified tables, i.e. cbind.createTable
class, are not supported when creating a Word document.